Mcarle, the blog post you reference only mentions issues with the rank tracker and the Pro reporting system.
There were issues with OSE that delayed the release of updated metrics - http://www.seomoz.org/blog/linkscape-index-delay-explained - but the most recent Mozscape data was released on May 1 - http://www.seomoz.org/blog/mozscape-update-our-largest-index-yet-159-billion-urls
IKHO, with the delays in the release of the new Mozscape data, it's very likely that the data is a little old and SEOmoz just hasn't had a chance to index the links you created for you new site. The next index update is schedule for the end of this month - http://apiwiki.seomoz.org/w/page/25141119/Linkscape%20Schedule