Should I Disavow?

[generalTC]

I had a Wordpress plugin on blog rolls and had a large number of links from a couple of sites that aren't necessarily related to our own. I've removed the links, but they are still showing up in Google Analytics and Moz Open Site Explorer. Based on my research, I don't think that removing these links will hurt us, and that removing them may help boost our ranking. Should I go ahead and disavow the links? Are there any other things I need to take into consideration?

[jesse-landry]

If you've removed the links in question then you should be fine and there is no reason to disavow. I am totally afraid of the disavow tool and use it as a last ditch effort only. If the data hasn't been updated it may be because your removal happened recently and these tools take awhile to update.

If those links aren't physically there then you will be fine no matter what the backlink tools report.

[generalTC]

We removed the links in June, but they are still showing up. At that point, there were 17,000 links from one site. Now there are around 8,000. If they are removed, they should no longer show in the report after Google re-crawls, right? At what point do we determine a last ditch effort? Are there any disadvantages to using the disavow tool other than the loss of potentially useful links?