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Just because you get more links doesn't mean they are "quality" links. You might have sites linking to you that google considers spammy or link farms. Go to google webmaster tools or moz and check out your in bound new links. see what there DA and PA are, and see if they are quality pages that should be linking to you. I will assume there are some in there that are paid links or spam links, go to google webmaster tools and remove the links.

Hello! It looks like your site is fairly new, and while most new sites and links will be indexed by our spiders and Open Site Explorer within 60 days, it can sometimes take even longer for many of reasons, including the crawl-ability of sites, the amount of inbound links to them, and the depth of pages in subdirectories. Just so you know, here's how we compile our index: - We grab the most recent index.     - We take the top 10 billion URLs with the highest MozRank (with a fixed limit on some of the larger domains).     - We start crawling from the top down until we've crawled 90,000,000,000 pages (which is about 35% the amount in Google's index). Which means, if the site is not linked to by one of these seed URLs (or one of the URLs linked to by them in the next update) then it won't show up in our index. Sorry! You can get a bit more info about our crawl here: http://moz.com/help/guides/research-tools/open-site-explorer.